Kazusa:PlantDB:miyakogusa
出典: KazusaWiki
About Miyakogusa
Lotus japonicus (Japanese common name: Miyakogusa) is a typical model legume with the characteristics of a short life cycle (2-3 months), self-fertility, and a relatively simple genome architecture of diploidy (n=6) that is small in size (472 Mb). Mutants in various biological phenomena specific to legumes such as symbiotic nitrogen fixation, and those common to flowering plants such as flower morphogenesis, have been characterized and the genes responsible have been isolated and further studied. The availability of the Agrobacterium-mediated DNA transformation system and genomic resources including a large number of ESTs/cDNA clones [1] , high-density genetic linkage maps [2] [3] [4] , and partial genome sequences[5] [6] [7] [8] [9] has played an essential role in this process. Here we report the first whole genome structure of the legume, L. japonicus, its characteristic genome features, and a variety of information and material resources that were developed during this study.
References
- ↑ Asamizu E, Nakamura Y, Sato S, Tabata S.
Characteristics of the Lotus japonicus gene repertoire deduced from large-scale expressed sequence tag (EST) analysis.
Plant Mol Biol. 2004 Feb; 54(3):405-14. PMID 15284495 - ↑ Hayashi M, Miyahara A, Sato S, Kato T, Yoshikawa M, Taketa M, Hayashi M, Pedrosa A, Onda R, Imaizumi-Anraku H, Bachmair A, Sandal N, Stougaard J, Murooka Y, Tabata S, Kawasaki S, Kawaguchi M, Harada K.
Construction of a genetic linkage map of the model legume Lotus japonicus using an intraspecific F2 population.
DNA Res. 2001 Dec; 8(6):301-10. PMID 11853317 - ↑ Sandal N, Krusell L, Radutoiu S, Olbryt M, Pedrosa A, Stracke S, Sato S,
Kato T, Tabata S, Parniske M, Bachmair A, Ketelsen T, Stougaard J.
A genetic linkage map of the model legume Lotus japonicus and strategies for fast mapping of new loci.
Genetics. 2002 Aug; 161(4):1673-83. PMID 12196410 - ↑ Sandal N, Petersen TR, Murray J, Umehara Y, Karas B, Yano K, Kumagai H,
Yoshikawa M, Saito K, Hayashi M, Murakami Y, Wang X, Hakoyama T, Imaizumi-Anraku
H, Sato S, Kato T, Chen W, Hossain MS, Shibata S, Wang TL, Yokota K, Larsen K,
Kanamori N, Madsen E, Radutoiu S, Madsen LH, Radu TG, Krusell L, Ooki Y, Banba M,
Betti M, Rispail N, Skøt L, Tuck E, Perry J, Yoshida S, Vickers K, Pike J, Mulder
L, Charpentier M, Müller J, Ohtomo R, Kojima T, Ando S, Marquez AJ, Gresshoff PM,
Harada K, Webb J, Hata S, Suganuma N, Kouchi H, Kawasaki S, Tabata S, Hayashi M,
Parniske M, Szczyglowski K, Kawaguchi M, Stougaard J.
Genetics of symbiosis in Lotus japonicus: recombinant inbred lines, comparative genetic maps, and map position of 35 symbiotic loci.
Mol Plant Microbe Interact. 2006 Jan; 19(1):80-91. PMID 16404956 - ↑ Sato S, Kaneko T, Nakamura Y, Asamizu E, Kato T, Tabata S.
Structural analysis of a Lotus japonicus genome. I. Sequence features and mapping of fifty-six TAC clones which cover the 5.4 mb regions of the genome.
DNA Res. 2001 Dec; 8(6):311-8. PMID 11853318 - ↑ Nakamura Y, Kaneko T, Asamizu E, Kato T, Sato S, Tabata S.
Structural analysis of a Lotus japonicus genome. II. Sequence features and mapping of sixty-five TAC clones which cover the 6.5-mb regions of the genome.
DNA Res. 2002 Apr; 9(2):63-70. PMID 12056416 - ↑ Kaneko T, Asamizu E, Kato T, Sato S, Nakamura Y, Tabata S.
Structural analysis of a Lotus japonicus genome. III. Sequence features and mapping of sixty-two TAC clones which cover the 6.7 Mb regions of the genome.
DNA Res. 2003 Feb; 10(1):27-33. PMID 12693552 - ↑ Asamizu E, Kato T, Sato S, Nakamura Y, Kaneko T, Tabata S.
Structural analysis of a Lotus japonicus genome. IV. Sequence features and mapping of seventy-three TAC clones which cover the 7.5 mb regions of the genome.
DNA Res. 2003 Jun; 10(3):115-22. PMID 12886953 - ↑ Kato T, Sato S, Nakamura Y, Kaneko T, Asamizu E, Tabata S.
Structural analysis of a Lotus japonicus genome. V. Sequence features and mapping of sixty-four TAC clones which cover the 6.4 mb regions of the genome.
DNA Res. 2003 Dec; 10(6):277-85. PMID 15029958
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